Publications

Date Title Author Journal
11/15/2023 Adding Value to Liquid Biopsy for Brain Tumors: The Role of Imaging Khalili, N., Shooli, H., Hosseini, N., Fathi Kazerooni, A., Familiar, A., Bagheri, S., Anderson, H., Bagley, S. J., & Nabavizadeh, A. Cancers Details
9/13/2023 Radio-pathomic Approaches in Pediatric Neuro-Oncology; Opportunities and Challenges Familiar, A. M., Mahtabfar, A., Kazerooni, A. F., Kiani, M., Vossough, A., Viaene, A., Storm, J. B., Resnick, A. C., & Nabavizadeh, A. Neuro-Oncology Advances Details
8/2/2023 Statistical Plots in Oncologic Imaging, A Primer for Neuroradiologists Bagheri, S., Taghvaei, M., Familiar, A., Haldar, D., Zandifar, A., Khalili, N., Vossough, A., & Nabavizadeh, A. The Neuroradiology Journal Details
6/19/2023 Radiomics for Characterization of the Glioma Immune Microenvironment Khalili, N., Kazerooni, A. F., Familiar, A., Haldar, D., Kraya, A., Foster, J., Koptyra, M., Storm, P. B., Resnick, A. C., & Nabavizadeh, A. Nature Precision Genomics Details
3/16/2023 Automated Tumor Segmentation and Brain Tissue Extraction from Multiparametric MRI of Pediatric Brain Tumors: A Multi-institutional Study Anahita Fathi Kazerooni, Sherjeel Arif, Rachel Madhogarhia, Nastaran Khalili, Debanjan Haldar, Sina Bagheri, Ariana M Familiar, Hannah Anderson, Shuvanjan Haldar, Wenxin Tu, Meen Chul Kim, Karthik Viswanathan, Sabine Muller, Michael Prados, Cassie Kline, Lorenna Vidal, Mariam Aboian, Phillip B Storm, Adam C Resnick, Jeffrey B Ware, Arastoo Vossough, Christos Davatzikos, Ali Nabavizadeh Neuro-Oncology Advances Details
3/1/2023 Current State of Pediatric Neuro-oncology Imaging, Challenges and Future Directions Nabavizadeh, A., Barkovich, M. J., Mian, A., Ngo, V., Kazerooni, A. F., & Villanueva-Meyer, J. E. Elsevier Details
2/28/2023 Unsupervised Machine Learning Using K-means Identifies Radiomic Subgroups of Pediatric Low-grade Gliomas that Correlate with Key Molecular Markers Haldar, D., Kazerooni, A. F., Arif, S., Familiar, A., Madhogarhia, R., Khalili, N., Bagheri, S., Anderson, H., Shaikh, I. S., Mahtabfar, A., Kim, M. C., Tu, W., Ware, J., Vossough, A., Davatzikos, C., Storm, P. B., Resnick, A. C., & Nabavizadeh, A. Neoplasia Details
5/27/2022 Radiomics and Radiogenomics in Pediatric Neuro-oncology: A Review Madhogarhia, R., Haldar, D., Bagheri, S., Familiar, A., Anderson, H., Arif, S., Vossough, A., Storm, P., Resnick, A., Davatzikos, C., Fathi Kazerooni, A., & Nabavizadeh, A. Neuro-Oncology Advances Details
10/1/2019 A pilot precision medicine trial for children with diffuse intrinsic pontine glioma—PNOC 003: A report from the Pacific Pediatric Neuro‐Oncology Consortium Sabine Mueller, Payal Jain, Winnie S. Liang, Lindsay Kilburn, Cassie Kline, Nalin Gupta, Eshini Panditharatna, Suresh N. Magge, Bo Zhang, Yuankun Zhu, John R. Crawford, Anu Banerjee, Kellie Nazemi, Roger J. Packer, Claudia K. Petritsch, Nathalene Truffaux, Alison Roos, Sara Nasser, Joanna J. Phillips, David Solomon, Annette Molinaro, Angela J. Waanders, Sara A. Byron, Michael E. Berens, John Kuhn, Javad Nazarian, Michael Prados, Adam C. Resnick The International Journal of Cancer Details
9/19/2019 Recurrent MSC(E116K) mutations in ALK-negative anaplastic large cell lymphoma Rebecca A. Luchtel, Michael T. Zimmermann, Guangzhen Hu, Surendra Dasari, Manli Jiang, Naoki Oishi, Hailey K. Jacobs, Yu Zeng, Tanya Hundal, Karen L. Rech, Rhett P. Ketterling, Jeong-Heon Lee, Bruce W. Eckloff, Huihuang Yan, Krutika S. Gaonkar, Shulan Tian, Zhenqing Ye, Marshall E. Kadin, Jagmohan Sidhu, Liuyan Jiang, Jesse Voss, Brian K. Link, Sergei I. Syrbu, Fabio Facchetti, N. Nora Bennani, Susan L. Slager, Tamas Ordog, Jean-Pierre Kocher, James R. Cerhan, Stephen M. Ansell, Andrew L. Feldman Blood Details
9/5/2019 Germline 16p11.2 Microdeletion Predisposes to Neuroblastoma Laura E. Egolf, Zalman Vaksman, Gonzalo Lopez, Jo Lynne Rokita, Apexa Modi, Patricia V. Basta, Hakon Hakonarson, Andrew F. Olshan, Sharon J.Diskin American Journal of Human Genetics Details
9/4/2019 The Genomics Research and Innovation Network: creating an interoperable, federated, genomics learning system Kenneth D. Mandl MD, MPH, Tracy Glauser MD, Ian D. Krantz MD, Paul Avillach MD, PhD, Anna Bartels MScPH, Alan H. Beggs PhD, Sawona Biswas MS, CGC, Florence T. Bourgeois MD, MPH, Jeremy Corsmo MPH, Andrew Dauber MD, MMSc, Batsal Devkota PhD, Gary R. Fleisher MD, Allison P. Heath PhD, Ingo Helbig MD, Joel N. Hirschhorn MD, PhD, Judson Kilbourn, Sek Won Kong MD, Susan Kornetsky MPH, Joseph A. Majzoub MD, Keith Marsolo PhD, Lisa J. Martin PhD, Jeremy Nix BS, Amy Schwarzhoff MS, MBA, Jason Stedman BA, Arnold Strauss MD, Kristen L. Sund PhD, MS, Deanne M. Taylor PhD, Peter S. White PhD & the Genomics Research and Innovation Network Genetics in Medicine Details
9/1/2019 Development and Clinical Validation of a Large Fusion Gene Panel for Pediatric Cancers Fengqi Chang, Fumin Lin, Kajia Ca, Lea F. Surrey, Richard Aplenc, Rochelle Bagatell, Adam C.Resnick, MariaritaSanti, Phillip B.Storm, Sarah K. Tasian, Angela J.Waanders, Stephen P. Hunger, Marilyn M. Li The Journal of Molecular Diagnostics Details
8/24/2019 Immunotherapy for pediatric brain tumors: past and present Jessica B Foster, Peter J Madsen, Meenakshi Hegde, Nabil Ahmed, Kristina A Cole, John M Maris, Adam C Resnick, Phillip B Storm, Angela J Waanders Neuro-Oncology Details
8/1/2019 Reduction of ventriculostomy-associated CSF infection with antibiotic-impregnated catheters in pediatric patients: a single-institution study Shih-Shan Lang MD , Bingqing Zhang MPH, Hugues Yver MD, Judy Palma BS, Matthew P. Kirschen MD, PhD, Alexis A. Topjian MD, MSCE, Benjamin Kennedy MD, Phillip B. Storm MD , Gregory G. Heuer MD, PhD, Janell L. Mensinger PhD, and Jimmy W. Huh MD Journal of Neurosurgery Details
7/23/2019 Sclerosing Epithelioid Fibrosarcoma of the Bone With Rare EWSR1-CREB3L3 Translocation Driving Upregulation of the PI3K/mTOR Signaling Pathway Archana Shenoy, Lea Surrey, Payal Jain, Jessica Foster, Joshua Straka, Adam Resnick, Angela Waanders, Minjie Luo, Marilyn Li, Ken Kazahaya, Rochelle Bagatell, John Wojcik, Jennifer Pogoriler Pediatric and Developmental Pathology Details
7/15/2019 Genome-wide association study identifies eight risk loci and implicates metabo-psychiatric origins for anorexia nervosa Hunna J. Watson, Zeynep Yilmaz, Laura M. Thornton, Christopher Hübel, Jonathan R. I. Coleman, Héléna A. Gaspar, Julien Bryois, Anke Hinney, Virpi M. Leppä, Manuel Mattheisen, Sarah E. Medland, Stephan Ripke, Shuyang Yao, Paola Giusti-Rodríguez, Anorexia Nervosa Genetics Initiative, Ken B. Hanscombe, Kirstin L. Purves, Eating Disorders Working Group of the Psychiatric Genomics Consortium, Roger A. H. Adan, Lars Alfredsson, Tetsuya Ando, Ole A. Andreassen, Jessica H. Baker, Wade H. Berrettini, Ilka Boehm, Claudette Boni, Vesna Boraska Perica, Katharina Buehren, Roland Burghardt, Matteo Cassina, Sven Cichon, Maurizio Clementi, Roger D. Cone, Philippe Courtet, Scott Crow, James J. Crowley, Unna N. Danner, Oliver S. P. Davis, Martina de Zwaan, George Dedoussis, Daniela Degortes, Janiece E. DeSocio, Danielle M. Dick, Dimitris Dikeos, Christian Dina, Monika Dmitrzak-Weglarz, Elisa Docampo, Laramie E. Duncan, Karin Egberts, Stefan Ehrlich, Geòrgia Escaramís, Tõnu Esko, Xavier Estivill, Anne Farmer, Angela Favaro, Fernando Fernández-Aranda, Manfred M. Fichter, Krista Fischer, Manuel Föcker, Lenka Foretova, Andreas J. Forstner, Monica Forzan, Christopher S. Franklin, Steven Gallinger, Ina Giegling, Johanna Giuranna, Fragiskos Gonidakis, Philip Gorwood, Monica Gratacos Mayora, Sébastien Guillaume, Yiran Guo, Hakon Hakonarson, Konstantinos Hatzikotoulas, Joanna Hauser, Johannes Hebebrand, Sietske G. Helder, Stefan Herms, Beate Herpertz-Dahlmann, Wolfgang Herzog, Laura M. Huckins, James I. Hudson, Hartmut Imgart, Hidetoshi Inoko, Vladimir Janout, Susana Jiménez-Murcia, Antonio Julià, Gursharan Kalsi, Deborah Kaminská, Jaakko Kaprio, Leila Karhunen, Andreas Karwautz, Martien J. H. Kas, James L. Kennedy, Anna Keski-Rahkonen, Kirsty Kiezebrink, Youl-Ri Kim, Lars Klareskog, Kelly L. Klump, Gun Peggy S. Knudsen, Maria C. La Via, Stephanie Le Hellard, Robert D. Levitan, Dong Li, Lisa Lilenfeld, Bochao Danae Lin, Jolanta Lissowska, Jurjen Luykx, Pierre J. Magistretti, Mario Maj, Katrin Mannik, Sara Marsal, Christian R. Marshall, Morten Mattingsdal, Sara McDevitt, Peter McGuffin, Andres Metspalu, Ingrid Meulenbelt, Nadia Micali, Karen Mitchell, Alessio Maria Monteleone, Palmiero Monteleone, Melissa A. Munn-Chernoff, Benedetta Nacmias, Marie Navratilova, Ioanna Ntalla, Julie K. O’Toole, Roel A. Ophoff, Leonid Padyukov, Aarno Palotie, Jacques Pantel, Hana Papezova, Dalila Pinto, Raquel Rabionet, Anu Raevuori, Nicolas Ramoz, Ted Reichborn-Kjennerud, Valdo Ricca, Samuli Ripatti, Franziska Ritschel, Marion Roberts, Alessandro Rotondo, Dan Rujescu, Filip Rybakowski, Paolo Santonastaso, André Scherag, Stephen W. Scherer, Ulrike Schmidt, Nicholas J. Schork, Alexandra Schosser, Jochen Seitz, Lenka Slachtova, P. Eline Slagboom, Margarita C. T. Slof-Op ‘t Landt, Agnieszka Slopien, Sandro Sorbi, Beata Świątkowska, Jin P. Szatkiewicz, Ioanna Tachmazidou, Elena Tenconi, Alfonso Tortorella, Federica Tozzi, Janet Treasure, Artemis Tsitsika, Marta Tyszkiewicz-Nwafor, Konstantinos Tziouvas, Annemarie A. van Elburg, Eric F. van Furth, Gudrun Wagner, Esther Walton, Elisabeth Widen, Eleftheria Zeggini, Stephanie Zerwas, Stephan Zipfel, Andrew W. Bergen, Joseph M. Boden, Harry Brandt, Steven Crawford, Katherine A. Halmi, L. John Horwood, Craig Johnson, Allan S. Kaplan, Walter H. Kaye, James E. Mitchell, Catherine M. Olsen, John F. Pearson, Nancy L. Pedersen, Michael Strober, Thomas Werge, David C. Whiteman, D. Blake Woodside, Garret D. Stuber, Scott Gordon, Jakob Grove, Anjali K. Henders, Anders Juréus, Katherine M. Kirk, Janne T. Larsen, Richard Parker, Liselotte Petersen, Jennifer Jordan, Martin Kennedy, Grant W. Montgomery, Tracey D. Wade, Andreas Birgegård, Paul Lichtenstein, Claes Norring, Mikael Landén, Nicholas G. Martin, Preben Bo Mortensen, Patrick F. Sullivan, Gerome Breen & Cynthia M. Bulik Nature Genetics Details
7/1/2019 Pediatric spinal cord biopsy: A case series from a high-volume referral center Michael Kakareka, Ryan Moncman, Joseph Georges, Steven Yocom, Philip B. Storm, Benjamin Kennedy Journal of Clinical Neuroscience Details
7/1/2019 Targeting PARP-1 with Alpha-Particles Is Potently Cytotoxic to Human Neuroblastoma in Preclinical Models Makvandi M, Lee H, Puentes LN, Reilly SW, Rathi KS, Weng CC, Chan HS, Hou C, Raman P, Martinez D, Xu K, Carlin SD, Greenberg RA, Pawel BR, Mach RH, Maris JM, Pryma DA Molecular Cancer Therapeutics Details
5/31/2019 Pediatric High Grade Glioma Resources From the Children’s Brain Tumor Network (CBTN) and Pediatric Brain Tumor Atlas (PBTA) Heba Ijaz, Mateusz Koptyra, Krutika S. Gaonkar, Jo Lynne Rokita, Valerie P. Baubet, Lamiya Tauhid, Yankun Zhu, Miguel Brown, View ORCID ProfileGonzalo Lopez, Bo Zhang, View ORCID ProfileSharon J. Diskin, View ORCID ProfileZalman Vaksman, Children’s Brain Tumor Tissue Consortium, Jennifer L. Mason, Elizabeth Appert, Jena Lilly, Rishi Lulla, Thomas De Raedt, Allison P. Heath, Alex Felmeister, Pichai Raman, Javad Nazarian, Maria Rita Santi, Phillip B. Storm, Adam Resnick, Angela J. Waanders, Kristina A. Cole bioRxiv: The Preprint Server for Biology Details
5/28/2019 Clinical utility of custom-designed NGS panel testing in pediatric tumors Surrey LF, MacFarland SP, Chang F, Cao K, Rathi KS, Akgumus GT, Gallo D, Lin F, Gleason A, Raman P, Aplenc R3, Bagatell R, Minturn J, Mosse Y, Santi M, Tasian SK, Waanders AJ, Sarmady M, Maris JM, Hunger SP, Li MM PubMed.gov Details
4/30/2019 Transcriptome signatures associated with meningioma progression Angela N. Viaene, Bo Zhang, Maria Martinez-Lage, Chaomei Xiang, Umberto Tosi, Jayesh P. Thawani, Busra Gungor, Yuankun Zhu, Laura Roccograndi, Logan Zhang, Robert L. Bailey, Phillip B. Storm, Donald M. O’Rourke, Adam C. Resnick, M. Sean Grady, and Nadia Dahmane Acta Neuropathologicaologica Details
4/1/2019 Lack of Sphenoid Pneumatization Does Not Affect Endoscopic Endonasal Pediatric Skull Base Surgery Outcomes Kuan, E. C., A. C. Kaufman, D. Lerner, M. A. Kohanski, C. C. L. Tong, B. A. Tajudeen, A. K. Parasher, J. Y. K. Lee, P. B. Storm, J. N. Palmer, and N. D. Adappa Laryngoscope Details
3/15/2019 Intratumoral genetic and functional heterogeneity in pediatric glioblastoma Hoffman M, Gillmor A, Kunz DJ, Johnston MJ, Nikolic A, Narta K, Zarrei M, King JC, Ellestad K, Dang NH, Cavalli FMG, Kushida M, Coutinho FJ, Zhu Y, Luu B, Ma Y, Mungall AJ, Moore RA, Marra MA, Taylor M, Pugh TJ, Dirks PB, Strother D, Lafay-Cousin L, Resnick AC, Scherer SW, Senger DL, Simons BD, Chan JA, Morrissy AS, Gallo M. Cancer Research Details
3/5/2019 IPMK Mediates Activation of ULK Signaling and Transcriptional Regulation of Autophagy Linked to Liver Inflammation and Regeneration Guha, P., R. Tyagi, S. Chowdhury, L. Reilly, C. Fu, R. Xu, A. C. Resnick, and S. H. Snyder Cell Rep. Details
3/1/2019 Genomics Driven Feasibility Trial to Guide a Precision Medicine Approach for Children with Diffuse Intrinsic Pontine Glioma: A Report from the Pacific Pediatric Neuro-Oncology Consortium (PNOC) Mueller, Sabine; Jain, Payal; Liang, Winnie; Kilburn, Lindsay; Kline, Cassie; Gupta, Nalin; Panditharatna, Eshini; Magge, Suresh; Zhang, Bo; Zhu, Yuankan; Crawford, John; Banerjee, Anu; Nazemi, Kellie; Packer, Roger; Petritsch, Claudia; Truffaux, Nathalene; Roos, Alison; Nasser, Sarah; Phillips, Joanna; Solomon, David; Molinaro, Annette; Waanders, Angela ; Byron, Sara; Berens, Michael; Kuhn, John; Nazarian, Javad; Prados, Michael; Resnick, Adam The International Journal of Cancer Details
2/1/2019 Genomics Driven Feasibility Trial To Guide A Precision Medicine Approach for Children with Diffuse Intrinsic Pontine Glioma – A Report from the Pacific Pediatric Neuro-Oncology Consortium (PNOC) Mueller, Sabine, Payal Jain, Winnie S. Liang, Lindsay Kilburn, Cassie Kline, Nalin Gupta, Eshini Panditharatna, Suresh N. Magge, Bo Zhang, Yuankun Zhu, John R. Crawford, Anu Baner- jee, Kellie Nazemi, Roger J. Packer7, Claudia K. Petritsch, Nathalene Truffaux, Alison Roos, Sara Nasser, Joanna J. Phillips, David Solomon, Annette Molinaro, Angela J. Waanders, Sara A. Byron, Michael E. Berens, John Kuhn, Javad Nazarian, Michael Prados, Adam C. Resnick International Journal of Cancer Details
2/1/2019 Successful Targeting of the RAF1 Gene Fusion in Anaplastic Pleomorphic Xanthoastrocytoma with Leptomeningeal Dissemination Touat, Mehdi Touat, Nadia Younan, Philipp Euskirchen, Maxime Fontanilles, Karima Mokhtari, Caroline Dehais, Patrick Tilleul, Amithys Rahimian-Aghda, Adam Resnick, Anne-Paule Gimenez-Roqueplo, Helene Blons, Khˆe Hoang-Xuan, Jean-Yves Delattre, Ahmed Idbaih, Pierre Laurent-Puig, and Marc Sanson JCO Precision Oncology Details
2/1/2019 Purification of mRNA Encoding Chimeric Antigen Receptor Is Critical for Generation of a Robust T-Cell Response Foster Jessica, Choudhari Namrata, Perazzelli Jessica, Storm Julie, Hofmann Ted J., Jain Payal, Storm Phillip, Pardi Norbert, Weissman Drew, Waanders Angela, Grupp Stephan A., Karikó Katalin, Resnick Adam, and Barrett David M Human Gene Therapy Details
1/24/2019 Separation of Craniopagus Twins by a Multidisciplinary Team Gregory G. Heuer, M.D., Ph.D., Peter J. Madsen, M.D., Tracy M. Flanders, M.D., Benjamin C. Kennedy, M.D., Phillip B. Storm, M.D., and Jesse A. Taylor, M.D. New England Journal of Medicine Details
12/1/2018 Standardization of prophylactic platelet transfusion dosing in a pediatric oncology population: a quality improvement project Leibowitz, Michael, Heather Wolfe, Andrea Flynn, Angela Waanders, Caroline Burlingame, Brenna Aumaier, David Friedman, and Michele P. Lambert Transfusion Details
11/1/2018 Intraoperative Intracranial Pressure Monitoring in the Pediatric Craniosynostosis Population Judy, B. F., J. W. Swanson, W. Yang, P. B. Storm, S. P. Bartlett, J. A. Taylor, G. G. Heuer, and S. S. Lang Journal of Neurosurgery Pediatrics Details
10/15/2018 Clinically Relevant and Minimally Invasive Tumor Surveillance of Pediatric Diffuse Midline Gliomas Using Patient-Derived Liquid Biopsy Panditharatna, Eshini, Lindsay B. Kilburn, Mariam S. Aboian, Madhuri Kambhampati, Heather Gordish-Dressman, Suresh N. Magge, Nalin Gupta, John S. Myseros, Eugene I. Hwang, Cassie Kline, John R. Crawford, Katherine E. Warren, Soonmee Cha, Winnie S. Liang, Michael E. Berens, Roger J. Packer, Adam C. Resnick, Michael Prados, Sabine Mueller, and Javad Nazarian Clinical Cancer Research Details
10/1/2018 Clinical utility of integrated genomic profiling in pediatric brain tumor Lin, Fumin, Fengqi Chang, Lea Surrey, Gozde Akgumus, Daniel Gallo, Kajia Cao, Mariarita Santi, Angela Waanders, and Marilyn Li Cancer Genetics Details
8/9/2018 Pancreatic cancer survival analysis defines a signature that predicts outcome Raman, Pichai, Ravikanth Maddipati, Kian Huat Lim, and Aydin Tozeren PLOS ONE Details
7/25/2018 De Novo Mutation in Genes Regulating Neural Stem Cell Fate in Human Congenital Hydrocephalus Furey, C. G., J. Choi, S. C. Jin, X. Zeng, A. T. Timberlake, C. Nelson-Williams, M. S. Mansuri, Q. Lu, D. Duran, S. Panchagnula, A. Allocco, J. K. Karimy, A. Khanna, J. R. Gaillard, T. DeSpenza, P. Antwi, E. Loring, W. E. Butler, E. R. Smith, B. C. Warf, J. M. Strahle, D. D. Limbrick, P. B. Storm, G. Heuer, E. M. Jackson, B. J. Iskandar, J. M. Johnston, I. Tikhonova, C. Castaldi, F. Lopez-Giraldez, R. D. Bjornson, J. R. Knight, K. Bilguvar, S. Mane, S. L. Alper, S. Haider, B. Guclu, Y. Bayri, Y. Sahin, M. L. J. Apuzzo, C. C. Duncan, M. L. DiLuna, M. Gunel, R. P. Lifton, and K. T. Kahle. Neuron Details
7/19/2018 Purification of mRNA encoding chimeric antigen receptor is critical for generation of robust T cell response Foster, J. B., Choudhari, N., Perezzelli, J., Storm, J., Hofmann, T. J., Jain, P., ... & Grupp, S. A. Human gene therapy Details
7/15/2018 Dual HDAC and PI3K Inhibition Abrogates NFκB- and FOXM1-Mediated DNA Damage Response to Radiosensitize Pediatric High-Grade Gliomas Pal, Sharmistha, David Kozono, Xiaodong Yang, Wojciech Fendler, Whitney Fitts, Jing Ni, John A. Alberta, Jean Zhao, Kevin X. Liu, Jie Bian, Nathalene Truffaux, William A. Weiss, Adam C. Resnick, Pratiti Bandopadhayay, Keith L. Ligon, Steven G. DuBois, Sabine Mueller, Dipanjan Chowdhury, and Daphne A. Haas-Kogan Cancer Research Details
7/1/2018 Abstract 923: The cBioPortal for Cancer Genomics: An intuitive open-source platform for exploration, analysis and visualization of cancer genomics data Gao, Jianjiong, Tali Mazor, Ersin Ciftci, Pichai Raman, Pieter Lukasse, Istemi Bahceci, Alexandros Sigaras, Adam Abeshouse, Ino de Bruijn, Benjamin Gross, Ritika Kundra, Aaron Lisman, Angelica Ochoa, Robert Sheridan, Jing Su, Selcuk O. Sumer, Yichao Sun, Avery Wang, Jiaojiao Wang, Manda Wilson, Hongxin Zhang, Priti Kumari, James Lindsay, Karthik Kalletla, Kelsey Zhu, Oleguer Plantalech, Fedde Schaeffer, Sander Tan, Dionne Zaal, Sjoerd van Hagen, Kees van Bochove, Ugur Dogrusoz, Trevor J. Pugh, Adam Resnick, Chris Sander, Nikolaus Schultz, and Ethan Cerami Cancer Research Details
7/1/2018 Abstract 2081: Empowering rare disease cohort biomarker discovery via comparative assessments of gene expression analysis platforms for FFPE pediatric brain tumor specimens Koptyra, Mateusz P., Namrata Choudhari, Zhang Zhe, Mariarita Santi, Angela Waanders, and Adam Resnick Cancer Research Details
6/22/2018 DIPG-76. PNOC-003: PRECISION MEDICINE TRIAL FOR CHILDREN WITH DIFFUSES INTRINSIC PONTINE GLIOMA: PRELIMINARY EXPERIENCE WITH MULTI-AGENT PERSONALIZED THERAPY RECOMMENDATIONS Hwang, Eugene, Javad Nazarian, Lindsay Kilburn, Roger Packer, Annette Molinaro, Anu Banerjee, Michael Prados, Nalin Gupta, Sabine Mueller, Theodore Nicolaides, Adam C Resnick, Kellie Nazemi, Michael Berens, Sara Byron, Winnie Liang, John Kuhn, and John Crawford Neuro-Oncology Details
6/22/2018 HGG-33. Patient Derived Cell Lines to Study Alternative Lengthening of Telomeres (ALT) in Pediatric Brain Tumors Ijaz, H, RL Dilley, MH Williams, MP Koptyra, JL Mason, AC Resnick, Y Zhu, B Zhang, AJ Waanders, and RA Greenberg Neuro-Oncology Details
6/22/2018 LGG-25. NOVEL FGFR2 FUSIONS DRIVE ONCOGENESIS VIA MAPK AND PI3K/mTOR PATHWAY ACTIVATION IN DYSEMBRYOPLASTIC NEUROEPITHELIAL TUMORS Jain, Payal, Lea Surrey, Joshua Straka, Minjie Luo, Adam Resnick, Phillip Storm, Mariarita Santi, Marilyn Li, and Angela Waanders Neuro-Oncology Details
6/22/2018 DIPG-51. BLACKFYNN: A SECURE, CLOUD-BASED PLATFORM FOR SHARING AND ANALYZING RESEARCH READY DATA FOR PEDIATRIC CNS CANCERS Johnson, Courtney, Madhuri Kambhampati, Roger Packer, Javad Nazarian, Alex Felmeister, Adam Resnick, Angela Waanders, Jennifer Mason, Amanda Christini, and Chris Baglieri Neuro-Oncology Details
6/22/2018 DIPG-53. COMPREHENSIVE CLINICAL AND MOLECULAR ANALYSIS OF PEDIATRIC THALAMIC GLIOMA Johnson, Courtney, Heloisa Moser, Madhuri Kambhampati, Krutica Gaonkar, Roger Packer, Adam Resnick, and Javad Nazarian Neuro-Oncology Details
6/22/2018 HGG-36. NFκB AND FOXM1 MEDIATE ANTI-CANCER ACTIVITY OF DUAL HDAC AND PI3K INHIBITION IN PEDIATRIC HIGH GRADE GLIOMA AND DIPG Pal, Sharmistha, David Kozono, Xiaodong Yang, Whitney Fitts, Jing Ni, John Alberta, Jean Zhao, Kevin Liu, Jie Bian, Nathalene Truffaux, William Weiss, Adam Resnick, Pratiti Bandhopadhayay, Keith Ligon, Steven DuBois, Sabine Mueller, Dipanjan Chowdhury, and Daphne Haas-Kogan Neuro-Oncology Details
6/22/2018 DIPG-32. CLINICALLY RELEVANT AND MINIMALLY INVASIVE TUMOR SURVEILLANCE IN PEDIATRIC GLIOMAS USING LIQUID BIOME Panditharatna, Eshini, Lindsay Kilburn, Mariam Aboian, Madhuri Kambhampati, Heather Gordish-Dressman, Suresh Magge, Nalin Gupta, John Myseros, Eugene Hwang, John Crawford, Kathy Warren, Adam Resnick, Roger Packer, Michael Prados, Sabine Muller and Javad Nazarian Neuro-Oncology Details
6/22/2018 TBIO-29. PedcBioPortal, A CANCER DATA VISUALIZATION TOOL FOR INTEGRATIVE PEDIATRIC CANCER ANALYSES Raman, Pichai, Komal Rathi, Karthik Kalletla, Yuankun Zhu, Bo Zhang, Nikolaus Schultz, Ethan Cerami, Alan Mackay, Chris Jones, and Sabine Mueller Neuro-Oncology Details
6/22/2018 TBIO-28. DISEASEXPRESS, A CANCER DATA ANALYTICS AND VISUALIZATION TOOL FOR IDENTIFYING IMMUNOTHERAPEUTIC TARGETS IN PEDIATRIC BRAIN TUMORS AND OTHER CANCERS https://academic.oup.com/neuro-oncology/article-abstract/20/suppl_2/i186/5001052?redirectedFrom=fulltext Neuro-Oncology Details
6/22/2018 HGG-40. HIGH GRADE GLIOMA CELL LINE COHORT AS AN EXAMPLE OF CHILDREN’S BRAIN TUMOR TISSUE CONSORTIUM TUMOR SPECIMEN PROCESSING PIPELINE Resnick, Adam, Angela Waanders, Heba Ijaz, Kristina Cole, Lamiya Tauhid, Mateusz Koptyra, Namrata Choudhari, Tiffany Smith, and Valerie Baubet Neuro-Oncology Details
6/22/2018 LGG-57. Functional Characterization and Effective Targeting of NRF1-BRAF and ATG7-RAF1 Fusions Identified in Anaplastic Pleomorphic Xanthoastrocytoma Patients Without BRAF p. V600E MUTATION Sonawane, Poonam, Patrick Diviney, Joanna Phillips, Payal Jain, Phillip Storm, Adam Resnick, and Angela Waanders Neuro-Oncology Details
5/14/2018 Molecular, Pathological, Radiological, and Immune Profiling of Non-brainstem Pediatric High-Grade Glioma from the HERBY Phase II Randomized Trial Mackay, Alan, Anna Burford, Valeria Molinari, David T. W. Jones, Elisa Izquierdo, Jurriaan Brouwer-Visser, Felice Giangaspero, Christine Haberler, Torsten Pietsch, Thomas S. Jacques, Dominique Figarella-Branger, Daniel Rodriguez, Paul S. Morgan, Pichai Raman, Angela J. Waanders, Adam C. Resnick, Maura Massimino, Maria Luisa Garrè, Helen Smith, David Capper, Stefan M. Pfister, Thomas Würdinger, Rachel Tam, Josep Garcia, Meghna Das Thakur, Gilles Vassal, Jacques Grill, Tim Jaspan, Pascale Varlet, and Chris Jones Cancer Cell Details
4/26/2018 In silico identification of neo-antigens in a high-grade pediatric brain tumor cohort utilizing next-generation sequencing: pilot study of a discovery pipeline for immunotherapy targets Madsen, Peter, Bo Zhang, Katherine Wang, Angela Waanders, Phillip Storm, and Adam Resnick Journal of Neurosurgery Details
4/2/2018 Shared ACVR1 mutations in FOP and DIPG: Opportunities and challenges in extending biological and clinical implications across rare diseases Han HJ, Jain P, Resnick AC Bone Details
4/1/2018 Plain-language medical vocabulary for precision diagnosis Vasilevsky, Nicole A., Erin D. Foster, Mark E. Engelstad, Leigh Carmody, Matt Might, Chip Chambers, Hugh J. S. Dawkins, Janine Lewis, Maria G. Della Rocca, Michelle Snyder, Cornelius F. Boerkoel, Ana Rath, Sharon F. Terry, Alastair Kent, Beverly Searle, Gareth Baynam, Erik Jones, Pam Gavin, Michael Bamshad, Jessica Chong, Tudor Groza, David Adams, Adam C. Resnick, Allison P. Heath, Chris Mungall, Ingrid A. Holm, Kayli Rageth, Catherine A. Brownstein, Kent Shefchek, Julie A. McMurry, Peter N. Robinson, Sebastian Köhler, and Melissa A. Haendel Nature Genetics Details
3/16/2018 Novel FGFR2-INA fusion identified in two low-grade mixed neuronal-glial tumors drives oncogenesis via MAPK and PI3K/mTOR pathway activation Jain, Payal, Lea F. Surrey, Joshua Straka, Minjie Luo, Fumin Lin, Brian Harding, Adam C. Resnick, Phillip B. Storm, Anna Maria Buccoliero, Mariarita Santi, Marilyn M. Li, and Angela J. Waanders. Acta Neuropathologica Details
3/5/2018 The landscape of genomic alterations across childhood cancer Gröbner, Susanne N., Barbara C. Worst, Joachim Weischenfeldt, Ivo Buchhalter, Kortine Kleinheinz, Vasilisa A. Rudneva, Pascal D. Johann, Gnana Prakash Balasubramanian, Maia Segura-Wang, Sebastian Brabetz, Sebastian Bender, Barbara Hutter, Dominik Sturm, Elke Pfaff, Daniel Hübschmann, Gideon Zipprich, Michael Heinold, Jürgen Eils, Christian Lawerenz, Serap Erkek, Sander Lambo, Sebastian Waszak, Claudia Blattmann, Arndt Borkhardt, Michaela Kuhlen, Angelika Eggert, Simone Fulda, Manfred Gessler, Jenny Wegert, Roland Kappler, Daniel Baumhoer, Stefan Burdach, Renate Kirschner-Schwabe, Udo Kontny, Andreas E. Kulozik, Dietmar Lohmann, Simone Hettmer, Cornelia Eckert, Stefan Bielack, Michaela Nathrath, Charlotte Niemeyer, Günther H. Richter, Johannes Schulte, Reiner Siebert, Frank Westermann, Jan J. Molenaar, Gilles Vassal, Hendrik Witt, Icgc PedBrain-Seq Project, Icgc Mmml- Seq Project, Birgit Burkhardt, Christian P. Kratz, Olaf Witt, Cornelis M. van Tilburg, Christof M. Kramm, Gudrun Fleischhack, Uta Dirksen, Stefan Rutkowski, Michael Frühwald, Katja von Hoff, Stephan Wolf, Thomas Klingebiel, Ewa Koscielniak, Pablo Landgraf, Jan Koster, Adam C. Resnick, Jinghui Zhang, Yanling Liu, Xin Zhou, Angela J. Waanders, Danny A. Zwijnenburg, Pichai Raman, Benedikt Brors, Ursula D. Weber, Paul A. Northcott, Kristian W. Pajtler, Marcel Kool, Rosario M. Piro, Jan O. Korbel, Matthias Schlesner, Roland Eils, David T. W. Jones, Peter Lichter, Lukas Chavez, Marc Zapatka, and Stefan M. Pfister Nature Details
2/25/2018 Outcomes of Pediatric Craniopharyngioma Resections after Open versus Expanded Endonasal Surgical Approach Douglas, Jennifer E., Bobby A. Tajudeen, Edward C. Kuan, Marvin Bergsneider, Marilene B. Wang, John Y. K. Lee, James N. Palmer, Nithin D. Adappa, and Phillip B. Storm. J Neurol Surg B Details
2/15/2018 The effect and evolution of patient selection on outcomes in endoscopic third ventriculostomy for hydrocephalus: A large-scale review of the literature Madsen, Peter J, Arka N Mallela, Eric D Hudgins, Phillip B Storm, Gregory G Heuer, and Sherman C Stein Journal of the Neurological Sciences Details
2/8/2018 Cerebrospinal Fluid Leak Repaired with Nasoseptal Flap in a 2-Week-Old Neonate Workman, Alan D., Ivy W. Maina, Vasiliki Triantafillou, James N. Palmer, Nithin D. Adappa, Phillip B. Storm, and Jordan T. Glicksman Neurol Surg B, Details
2/2/2018 Posttreatment Rhinosinusitis following Endoscopic Resection of Pediatric Craniopharyngioma Tong, Charles C., Edward C. Kuan, Seerat K. Poonia, Michael A. Kohanski, Justina L. Lambert, Phillip B. Storm, James N. Palmer, and Nithin D. Adappa J Neurol Surg B Details
1/22/2018 Pediatric low-grade gliomas: next biologically driven steps Jones DTW, Kieran MW, Bouffet E, Alexandrescu S, Bandopadhayay P, Bornhorst M, Ellison D, Fangusaro J, Fisher MJ, Foreman N, Fouladi M, Hargrave D, Hawkins C, Jabado N, Massimino M, Mueller S, Perilongo G, Schouten van Meeteren AYN, Tabori U, Warren K, Waanders AJ, Walker D, Weiss W, Witt O, Wright K, Zhu Y, Bowers DC, Pfister SM, Packer RJ Neuro Oncology Details
1/5/2018 Aggressive triple negative breast cancers have unique molecular signature on the basis of mitochondrial genetic and functional defects Guha, Manti, Satish Srinivasan, Pichai Raman, Yuefu Jiang, Brett A. Kaufman, Deanne Taylor, Dawei Dong, Rumela Chakrabarti, Martin Picard, Russ P. Carstens, Yuko Kijima, Mike Feldman, and Narayan G. Avadhani Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease Details
1/1/2018 Oculoplastic Considerations in Pediatric Craniofacial Surgery Naran, Sanjay, Michael F. Spadola, Phillip B. Storm, and Scott P. Bartlett Pediatric Oculoplastic Surgery Details
11/6/2017 PDTM-40. PEDIATRIC LOW-GRADE GLIOMAS WITH CRAF GENE FUSIONS ARE THERAPEUTICALLY DISTINCT FROM BRAF-FUSIONS BASED ON DIMERIZATION MEDIATED BY N-TERMINAL FUSION PARTNER Jain, Payal, Tamara Fierst, Harry Han, Tiffany Smith, Phillip B. Storm, Angela J. Waanders, and Adam C. Resnick Neuro-Oncology Details
11/6/2017 EXTH-58. EFFECTS OF TORC1/2 INHIBITOR MLN0128 ALONE AND IN COMBINATION WITH MEK INHIBITION IN BRAF MUTATED GLIOMA MODELS IN VITRO AND IN VIVO Liu, Kevin X., Sabine Mueller, Rogier Dik, Xiaodong Yang, Steven DuBois, Angela J. Waanders, Adam C. Resnick, William A. Weiss, and Daphne Haas-Kogan Neuro-Oncology Details
11/1/2017 Developing Cancer Informatics Applications and Tools Using the NCI Genomic Data Commons API Wilson, Shane, Michael Fitzsimons, Martin Ferguson, Allison Heath, Mark Jensen, Josh Miller, Mark W. Murphy, James Porter, Himanso Sahni, Louis Staudt, Yajing Tang, Zhining Wang, Christine Yu, Junjun Zhang, Vincent Ferretti, and Robert L. Grossman Cancer Research Details
10/18/2017 Comprehensive Analysis of Hypermutation in Human Cancer Campbell, BB., Light, N., Fabrizio, D., Zatzman, M., Fuligni, F., de Borja, R., Davidson, S., Edwards, M., Elvin, JA., Hodel, KP., Zahurancik, WJ., Suo, Z., Lipman, T., Wimmer, K., Kratz, CP., Bowers, DC., Laetsch, TW., Dunn, GP., Johanns, TM., Grimmer, MR., Smirnov, IV., Larouche, V., Samuel, D., Bronsema, A., Osborn, M., Stearns, D., Raman, P., Cole, K., Storm, PB., Yalon, M., Opocher, E., Mason, G., Thomas, GA., Sabel, M., George, B., Ziegler, DS., Lindhorst, S., Issai VM., Constantini, S., Toledano, H., Elhasid, R., Farah, R., Dvir, R., Dirks, P., Huang, A., Galati, MA., Chung, J., Ramaswamy, V., Irwin, MS., Aronson, M., Durno, C., Taylor, MD., Rechavi, G., Maris, JM., Bouffet, E., Hawkins, C., Costello, JF., Meyn, MS., Pursell, ZF., Malkin, D., Tabori, U., Shlien, A. PubMed Details
10/12/2017 Novel findings with reassessment of exome data: implications for validation testing and interpretation of genomic data Gibson, Kristin McDonald, Addie Nesbitt, Kajia Cao, Zhenming Yu, Elizabeth Denenberg, Elizabeth DeChene, Qiaoning Guan, Elizabeth Bhoj, Xiangdong Zhou, Bo Zhang, Chao Wu, Holly Dubbs, Alisha Wilkens, Livija Medne, Emma Bedoukian, Peter S. White, Jeffrey Pennington, Minjie Lou, Laura Conlin, Dimitri Monos, Mahdi Sarmady, Eric Marsh, Elaine Zackai, Nancy Spinner, Ian Krantz, Matt Deardorff, and Avni Santani Genetics in Medicine Details
10/9/2017 Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma Alan Mackay, Anna Burford, Diana Carvalho, Elisa Izquierdo, Janat Fazal-Salom, Kathryn R. Taylor, Lynn Bjerke, Matthew Clarke, Mara Vinci, Meera Nandhabalan, Sara Temelso, Sergey Popov, Valeria Molinari, Pichai Raman, Angela J. Waanders, Harry J. Han, Saumya Gupta, Lynley Marshall, Stergios Zacharoulis, Sucheta Vaidya, Henry C. Mandeville, Leslie R. Bridges, Andrew J. Martin, Safa Al-Sarraj, Christopher Chandler, Ho-Keung Ng, Xingang Li, Kun Mu, Saoussen Trabelsi, Dorra H’mida-Ben Brahim, Alexei N. Kisljakov, Dmitry M. Konovalov, Andrew S. Moore, Angel Montero Carcaboso, Mariona Sunol, Carmen de Torres, Ofelia Cruz, Jaume Mora, Ludmila I. Shats, João N. Stavale, Lucas T. Bidinotto, Rui M. Reis, Natacha Entz-Werle, Michael Farrell, Jane Cryan, Darach Crimmins, John Caird, Jane Pears, Michelle Monje, Marie-Anne Debily, David Castel, Jacques Grill, Cynthia Hawkins, Hamid Nikbakht, Nada Jabado, Suzanne J. Baker, Stefan M. Pfister, David T.W. Jones, Maryam Fouladi, André O. von Bueren, Michael Baudis, Adam Resnick, Chris Jones Cancer Cell Details
9/22/2017 GPC2 MAY BE AN IMMUNOTHERAPEUTIC TARGET IN HIGH-RISK NEUROBLASTOMA Bosse, KR, P Raman, Z Zhu, M Lane, D Martinez, and S Heitzeneder. 2017. "GPC2 MAY BE AN IMMUNOTHERAPEUTIC TARGET IN HIGH-RISK NEUROBLASTOMA." In.: AMER ASSOC CANCER RESEARCH 615 CHESTNUT ST, 17TH FLOOR, PHILADELPHIA, PA 19106-4404 USA. AMER ASSOC CANCER RESEARCH Details
9/15/2017 Overcoming Resistance to Single-agent Therapy for Oncogenic BRAF Gene Fusions via Combinatorial Targeting of MAPK and PI3K/mTOR Signaling Pathways Payal Jain, Amanda Silva, Harry J. Han, Shih-Shan Lang, Yuankun Zhu, Katie Boucher, Tiffany E. Smith, Aesha Vakil, Patrick Diviney, Namrata Choudhari, Pichai Raman, Christine M. Busch, Tim Delaney, Xiaodong Yang, Aleksandra K. Olow, Sabine Mueller, Daphne Haas-Kogan, Elizabeth Fox, Phillip B. Storm, Adam C. Resnick and Angela J. Waanders Oncotarget Details
9/11/2017 Identification of GPC2 as an Oncoprotein and Candidate Immunotherapeutic Target in High-Risk Neuroblastoma Kristopher R. Bosse, Pichai Raman, Zhongyu Zhu, Maria Lane, Daniel Martinez, Sabine Heitzeneder, Komal S. Rathi, Nathan M. Kendsersky, Michael Randall, Laura Donovan, Sorana Morrissy, Robyn T. Sussman13, Doncho V. Zhelev, Yang Feng, Yanping Wang, Jennifer Hwang, Gonzalo Lopez, Jo Lynne Harenza, Jun S. Wei, Bruce Pawel, Tricia Bhatti, Mariarita Santi, Arupa Ganguly, Javed Khan, Marco A. Marra, Michael D. Taylor, Dimiter S. Dimitrov, Crystal L. Mackall, John M. Maris Cancer Cell Details
8/14/2017 CRAF Gene Fusions in Pediatric Low-grade Gliomas Define a Distinct Drug Response Based on Dimerization Profiles Jain, P., T. M. Fierst, H. J. Han, T. E. Smith, A. Vakil, P. J. Storm, A. C. Resnick, and A. J. Waanders. Oncogene Details
8/2/2017 Shared ACVR1 Mutations in FOP and DIPG: Opportunities and Challenges in Extending Biological and Clinical Implications Across Rare Diseases Harry J. Han , Payal Jain, Adam C. Resnick, Children's Hospital of Philadelphia Bone Details
7/1/2017 Abstract 2593: Accelerating pediatric brain tumor research through team science solutions Christini, Amanda, Angela J. Waanders, Joost B. Wagenaar, Alex S. Felmeister, Mariarita Santi, Nitin R. Wadhwani, Jennifer L. Mason, Mateusz P. Koptyra, Jena V. Lilly, Jeffrey W. Pennington, Rishi R. Lulla, and Adam C. Resnick. Cancer Research Details
7/1/2017 Abstract 5614: Novel mRNA purification method with RNaseIII improves efficacy of RNA chimeric antigen receptor T cells Foster, Jessica, Namrata Choudhari, Adam Resnick, and David Barrett Cancer Research Details
7/1/2017 Abstract 2607: The cBioPortal for Cancer Genomics: an open source platform for accessing and interpreting complex cancer genomics data in the era of precision medicine Gao, Jianjiong, Ersin Ciftci, Pichai Raman, Pieter Lukasse, Istemi Bahceci, Adam Abeshouse, Hsiao-Wei Chen, Ino de Bruijn, Benjamin Gross, Zachary Heins, Ritika Kundra, Aaron Lisman, Angelica Ochoa, Robert Sheridan, Onur Sumer, Yichao Sun, Jiaojiao Wang, Manda Wilson, Hongxin Zhang, James Xu, Andy Dufilie, Priti Kumari, James Lindsay, Anthony Cros, Karthik Kalletla, Fedde Schaeffer, Sander Tan, Sjoerd van Hagen, Jorge Reis-Filho, Kees van Bochove, Ugur Dogrusoz, Trevor Pugh, Adam Resnick, Chris Sander, Ethan Cerami, and Nikolaus Schultz Cancer Research Details
7/1/2017 Abstract 3000: Defining the subclonal landscape of high-risk neuroblastoma Harenza, Jo Lynne, Maura A. Diamond, Derek A. Oldridge, Olivia Padovan-Merher, Pichai Raman, Yael P. Mosse, and John M. Maris Cancer Research Details
7/1/2017 Abstract 4887: Comprehensive molecular analysis of pediatric thalamic tumors Moser, Heloisa H., Susanne Yoon, Madhuri Kambhampati, Sridevi Yadavilli, Angela J. Waanders, Adam Resnick, Roger J. Packer, and Javad Nazarian Cancer Research Details
7/1/2017 Abstract LB-008: The Pediatric Brain Tumor Atlas: building an integrated, multi-platform data-rich ecosystem for collaborative discovery in the cloud Resnick, Adam C., Phillip B. Storm, Angela J. Waanders, Jena V. Lilly, Rishi R. Lulla, Sabine Mueller, Michael Prados, Leonard S. Sender, Allison Heath, Alex S. Felmeister, Anthony Cros, Yuankun Zhu, and Pichai Raman Cancer Research Details
6/30/2017 The functional variant rs34330 of CDKN1B is associated with risk of neuroblastoma Capasso, Mario, Lee D. McDaniel, Flora Cimmino, Andrea Cirino, Daniela Formicola, Mike R. Russell, Pichai Raman, Kristina A. Cole, and Sharon J. Diskin. Journal of Cellular and Molecular Medicine Details
6/3/2017 Data Commons to Support Pediatric Cancer Research Volchenboum, SL, SM Cox, A Heath, A Resnick, SL Cohn, and R Grossman American Society of Clinical Oncology Details
5/31/2017 Pediatric Low-grade Gliomas with CRAF Gene Fusions are Therapeutically Distinct from Braf-Fusions Based on Dimerization Mediated by N-Terminal Fusion Partner Payal Jain Tamara M. Fierst Harry Han Tiffany Smith Phillip J. Storm Angela J. Waanders Adam C. Resnick Neuro Oncology Details
5/31/2017 GERM-01. GENETIC AND EPIGENETIC LANDSCAPE OF CENTRAL NERVOUS SYSTEM GERM CELL TUMORS Ichimura, Koichi, Yoshiko Nakano, Kai Yamasaki, Mai Kitahara, Kaishi Satomi, Hirokazu Takami, Shintaro Fukushima, Masao Matsutani, and Ryo Nishikawa Neuro-Oncology Details
5/26/2017 Rb family proteins enforce the homeostasis of quiescent hematopoietic stem cells by repressing Socs3 expression Kim, E., Y. Cheng, E. Bolton-Gillespie, X. Cai, C. Ma, A. Tarangelo, L. Le, M. Jambhekar, P. Raman, K. E. Hayer, G. Wertheim, N. A. Speck, W. Tong, and P. Viatour J Exp Med Details
4/4/2017 The Pediatric Brain Tumor Atlas: Building an Integrated, Multi-platform Data-Rich Ecosystem For Collaborative Discovery in the Cloud Adam C. Resnick, Phillip B. Storm, Angela J. Waanders, Jena V. Lilly, Rishi R. Lulla, Sabine Mueller, Michael Prados, Leonard S. Sender, Allison Heath, Alex S. Felmeister, Anthony Cros, Yuankun Zhu, Pichai Raman, Children's Hospital of Philadelphia, UCSF Benioff Children's Hospital, CHOC Children's, Ann & Robert H. Lurie Children's Hospital of Chicago American Association of Cancer Research (AACR) Details
2/20/2017 Transcriptome Analysis of IL-10-stimulated (M2c) Macrophages by Next-generation Sequencing Lurier, E.B., Dalton, D., Dampier, W., Raman, P., Nassiri, S., Ferraro, N.M., Rajagopalan, R., Sarmady, M. and Spiller, K.L. Immunobiology Details
1/12/2017 MYB-QKI Drives Childhood Brain Tumors Via Tripartite Mechanism Jain, P., and A. C. Resnick Cell Cycle Details
12/20/2016 Enrichment of Targetable Mutations in the Relapsed Neuroblastoma Genome Olivia M. Padovan-Merhar , Pichai Raman , Irina Ostrovnaya, Karthik Kalletla, Kaitlyn R. Rubnitz, Eric M. Sanford, Siraj M. Ali, Vincent A. Miller, Yael P. Mossé, Meaghan P. Granger, Brian Weiss, John M. Maris , Shakeel Modak PLOS Genetics Details
12/14/2016 MYB-QKI Drives Childhood Brain Tumors via Tripartite Mechanism Payal Jain & Adam C. Resnick, Center for Data Driven Discovery in Biomedicine at Children's Hospital of Philadelphia Cell Cycle Details
11/21/2016 PedcBioPortal: A cancer data visualization tool for integrative pediatric cancer analyses Pichai Raman, Alex S Felmeister, Phillip B Storm, Rishi R.Lulla, Angela J Waanders, and Adam C Resnick, on behalf of the complete team membership of the Children’s Brain Tumor Tissue Consortium (CBTTC)., CBTTC THE SOCIETY FOR NEURO-ONCOLOGY Details
11/7/2016 PedcBioPortal: A Cancer Data Visualization Tool for Integrative Pediatric Cancer Analyses Pichai Raman, Adam C Resnick, Phillip B Storm, Sabine Mueller, Nikolaus Schultz, Ethan Cerami, John M Maris, Angela J Waanders. Neuro-Oncology Details
11/1/2016 Inositol Polyphosphates Intersect with Signaling and Metabolic Networks via Two Distinct Mechanisms Wu M, Chong LS, Perlman DH, Resnick AC, Fiedler D Proceedings of the National Academy of Sciences of the United States of America Details
11/1/2016 BRAF Status in Personalizing Treatment Approaches for Pediatric Gliomas Olow, A., S. Mueller, X. Yang, R. Hashizume, J. Meyerowitz, W. Weiss, A. C. Resnick, A. J. Waanders, L. J. Stalpers, M. S. Berger, N. Gupta, C. D. James, C. K. Petritsch, and D. A. Haas-Kogan Clinical Cancer Research Details
10/31/2016 Cavatica: empowering research with a pediatric genomic cloud Pichai Raman, Alex S Felmeister, Phillip B Storm, Rishi R.Lulla, Angela J Waanders, and Adam C Resnick, on behalf of the complete team membership of the Children’s Brain Tumor Tissue Consortium (CBTTC)., CBTTC CAC2 Details
8/18/2016 The Biorepository Portal Toolkit: An Honest-Brokered, Modular, Service-Oriented Software Tool Set for Biospecimen-driven Translational Research Alex S. Felmeister, Aaron J. Masino, Tyler J. Rivera, Adam C. Resnick and Jeffrey W. Pennington, Children's Hospital of Philadelphia BioMed Central Genomics Details
7/1/2016 Pediatric Low-grade Gliomas with CRAF Fusions Respond Differentially to Targeted Therapeutics Based on their Dimerization Profiles Payal Jain, Tamara Fierst, Amanda Silva, Jake Budlow, Harry Han, Phillip B. Storm, Angela Waanders and Adam Resnick AACR Cancer Research Details
7/1/2016 Pediatric low-grade gliomas with CRAF fusions respond differentially to targeted therapeutics based on their dimerization profiles Payal Jain, Tamara Fierst, Amanda Silva, Jake Budlow, Harry Han, Phillip B. Storm, Angela Waanders, and Adam Resnick American Association for Cancer Research Details
6/18/2016 Development of robust in vitro and in vivo preclinical models for diffuse intrinsic pontine glioma Yadavilli S, Yang X, Kilburn L, Kilburn L, Magge S, Kambhampati M, Waanders A, Han H. Muellar S, Resnick A, Packer R, Nazarian J Neuro-Oncology Details
5/30/2016 ACVR1-Mutant diffuse intrinsic pontine gliomas (DIPGS) acquire abeerant activin-mediated bmp pathway activation Harry Han, Valerie Baubet, Katie Boucher, Robert Pignolo, Frederick Kaplan, Eileen Shore, Phillip Storm, Nadia Dahmane, and Adam Resnick Neuro-Oncology Details
5/30/2016 Precision Medicine Approach for Children with Diffuse Intrinsic Pontine Glioma Mueller S, Liang W, Gupta N, Kuhn J, Kilburn L, Crawford J, Banerjee A, Nazemi K, Packer R, Nazarian J, Petritsch C, Truffaux N, Roos A, Nicolaides T, Waanders A, Resnick A, Craig D, Carpten J, Byron S, Berens M, Prados M Neuro-Oncology Details
2/1/2016 MYB-QKI rearrangements in angiocentric glioma drive tumorigenicity through a tripartite mechanism Pratiti Bandopadhayay, Lori A Ramkissoon, Payal Jain, Guillaume Bergthold, Jeremiah Wala, Rhamy Zeid, Steven E Schumacher, Laura Urbanski, Ryan O'Rourke, William J Gibson, Kristine Pelton, Shakti H Ramkissoon, Harry J Han, Yuankun Zhu, Namrata Choudhari, Amanda Silva, Katie Boucher, Rosemary E Henn, Yun Jee Kang, David Knoff, Brenton R Paolella, Adrianne Gladden-Young, Pascale Varlet, Melanie Pages, Peleg M Horowitz, Alexander Federation, Hayley Malkin, Adam A Tracy, Sara Seepo, Matthew Ducar, Paul Van Hummelen, Mariarita Santi, Anna Maria Buccoliero, Mirko Scagnet, Daniel C Bowers, Caterina Giannini, Stephanie Puget, Cynthia Hawkins, Uri Tabori, Almos Klekner, Laszlo Bognar, Peter C Burger, Charles Eberhart, Fausto J Rodriguez, D Ashley Hill, Sabine Mueller, Daphne A Haas-Kogan, Joanna J Phillips, Sandro Santagata, Charles D Stiles, James E Bradner, Nada Jabado, Alon Goren, Jacques Grill, Azra H Ligon, Liliana Goumnerova, Angela J Waanders, Phillip B Storm, Mark W Kieran, Keith L Ligon, Rameen Beroukhim, Adam C Resnick Nature Genetics Details
1/30/2016 A Novel Inositol Pyrophosphate Phosphatase in Saccharomyces cerevisiae: Siw14 Protein selectively cleaves the β- Phosphate from 5-Diphosphoinositol pentakisphosphate (5PP-IP5) Elizabeth A. Steidle, Lucy S. Chong, Mingxuan Wu, Elliot Crooke, Dorothea Fiedler, Adam C. Resnick and Ronda J. Rolfes Journal of Biological Chemistry Details
12/17/2015 Scalable Biobanking: A Modular Electronic Honest Broker and Biorepository for Integrated Clinical, Specimen and Genomic Research Alex S. Felmeister, Tyler J. Rivera, Aaron J. Masino, Adam C. Resnick, Jeffrey W. Pennington, Children's Hospital of Philadelphia 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Details
11/5/2015 MAPK Signaling Cascades Mediate Distinct Glucocorticoid Resistance Mechanisms in Pediatric Leukemia Jones, C. L., C. M. Gearheart, S. Fosmire, C. Delgado-Martin, N. A. Evensen, K. Bride, A. J. Waanders, F. Pais, J. Wang, T. Bhatla, D. S. Bitterman, S. R. de Rijk, W. Bourgeois, S. Dandekar, E. Park, T. M. Burleson, P. P. Madhusoodhan, D. T. Teachey, E. A. Raetz, M. L. Hermiston, M. Muschen, M. L. Loh, S. P. Hunger, J. Zhang, M. J. Garabedian, C. C. Porter, and W. L. Carroll Blood Details
11/5/2015 MAPK Signaling Cascades Mediate Distinct Glucocorticoid Resistance Mechanisms in Pediatric Leuke-mia Jones, C. L., C. M. Gearheart, S. Fosmire, C. Delgado-Martin, N. A. Evensen, K. Bride, A. J. Waanders, F. Pais, J. Wang, T. Bhatla, D. S. Bitterman, S. R. de Rijk, W. Bourgeois, S. Dandekar, E. Park, T. M. Burleson, P. P. Madhusoodhan, D. T. Teachey, E. A. Raetz, M. L. Hermiston, M. Mus-chen, M. L. Loh, S. P. Hunger, J. Zhang, M. J. Garabedian, C. C. Porter, and W. L. Carroll Blood Details
11/1/2015 Pediatric Nasoseptal Flap Reconstruction for Suprasellar Approaches Ghosh, A., K. Hatten, K. O. Learned, M. D. Rizzi, J. Y. Lee, P. B. Storm, J. N. Palmer, and N. D. Adappa Laryngoscope Details
10/1/2015 A 6-Year-Old With Leg Cramps Jenssen, B. P., A. J. Lautz, J. L. Orthmann-Murphy, S. W. Yum, A. Waanders, and E. Fox Pediatrics Details
8/24/2015 Endoscopic Approaches to Brainstem Cavernous Malformations: Case Series and Review of the Literature Nayak, N. R., J. P. Thawani, M. R. Sanborn, P. B. Storm, and J. Y. Lee Surgical Neurology International Details
4/21/2015 Combinatorial pathway targeting approaches for BRAF fusions associated with pediatric low-grade gliomas. Waanders A, Silva A, Chen S-S, Han H, Zhu Y, Boucher K, Jain P, Fierst T, Choudhari N, Mueller S, Haas-Kogan D, Storm P, Resnick A Neuro Oncology Details
4/21/2015 Targeted combinatorial approach for treatment of pediatric low grade gliomas in the context of BRAFV600E and KIAA1549:BRAF mutations. Olow AK, Mueller S, Yang X, Hashizume R, Meyerowitz J, Weiss W, Resnick A, Waanders A, Berger M, Gupta N, James CD, Hass-Kogan D Neuro Oncology Details
4/21/2015 Effects of TORC1/2 inhibitor MLN0128 alone and in combination with MEK inhibition in BRAF mutated glioma cells. Mueller S, Dik R, Yang X, Aleksandra O, Gustafson C, DuBois S, Weiss W, Waanders A, Resnick A, Haas-Kogan D Neuro-Oncology Details
11/3/2014 Greater Fluctuations in Serum Sodium Levels Are Associated with Increased Mortality in Children With Externalized Ventriculostomy Drains in A PICU Topjian, A. A., A. Stuart, A. A. Pabalan, A. Clair, T. J. Kilbaugh, N. S. Abend, P. B. Storm, R. A. Berg, J. W. Huh, and S. H. Friess Pediatric Critical Care Medicine Details
10/1/2014 Risk Factors Associated with Infections and Need for Permanent Cerebrospinal Fluid Diversion in Pediatric Intensive Care Patients With Externalized Ventricular Drains Topjian, A. A., A. Stuart, A. A. Pabalan, A. Clair, T. J. Kilbaugh, N. S. Abend, R. A. Berg, G. G. Heuer, P. B. Storm, Jr., J. W. Huh, and S. H. Friess Neurocritical Care Details
2/3/2014 Exome sequencing identifies BRAF mutations in papillary craniopharyngiomas Brastianos PK, Taylor-Weiner A, Manley PE, Jones RT, Dias-Santagata D, ThornerAR, Lawrence MS, Rodriguez FJ, Bernardo LA, Schubert L, Sunkavalli A, Shillingford N, Calicchio ML, Lidov HG, Taha H, Martinez-Lage M, Santi M, Storm PB, Lee JY, Palmer JN, Adappa ND, Scott RM, Dunn IF, Laws ER Jr, Stewart C, LigonKL, Hoang MP, Van Hummelen P, Hahn WC, Louis DN, Resnick AC, Kieran MW, Getz G, Santagata S. Nature Genetics Details
2/3/2014 Anti-N-methyl-D-aspartate Receptor-mediated Encephalitis in Infants and Toddlers: Case Report And Review of the Literature Goldberg, E. M., M. Titulaer, P. M. de Blank, A. Sievert, and N. Ryan Pediatr Neurol Details
2/3/2014 Anti-N-methyl-D-as-partate Receptor-mediated Encephalitis in Infants and Toddlers: Case Report And Review of the Literature Goldberg, E. M., M. Titulaer, P. M. de Blank, A. Sievert, and N. Ryan. Pediatric Neurology Details
7/1/2013 Monobloc Minus Le Fort II For Single-stage Treatment of the Apert Phenotype Paliga, J. T., J. A. Goldstein, P. B. Storm, and J. A. Taylor Journal of Craniofacial Surgery Details
5/21/2013 Paradoxical Activation and RAF Inhibitor Resistance of BRAF Protein Kinase Fusions Characterizing Pediatric Astrocytomas Sievert, A. J., S. S. Lang, K. L. Boucher, P. J. Madsen, E. Slaunwhite, N. Choudhari, M. Kellet, P. B. Storm, and A. C. Resnick Proceedings of the National Academy of Sciences of USA Details
12/17/2012 Cerebral Salt Wasting Syndrome in Post-op-erative Pediatric Brain Tumor Patients Hardesty DA, Kilbaugh TJ, Storm PB. Neurocritical Care Details
11/1/2012 Cranial irradiation increases risk of stroke in pediatric brain tumor survivors Campen CJ, Kranick SM, Kasner SE, Kessler SK, Zimmerman RA, Lustig R, Phillips PC, Storm PB, Smith SE, Ichord R, Fisher MJ Stroke Details
7/2/2012 Surgical Treatment of Brain Tumors in Infants Younger Than Six Months of Age and Review of the Literature Lang, S. S., L. A. Beslow, B. Gabel, A. R. Judkins, M. J. Fisher, L. N. Sutton, P. B. Storm, and G. G. Heuer World Neurosurgery Details
6/4/2012 Spinal Cord Ependymomas and Myxopapillary Ependymomas on the First 2 Decades of Life: A Clinicopathological and Immunohistochemical Characterization of 19 Cases Stephen, J. H., A. J. Sievert, P. J. Madsen, A. R. Judkins, A. C. Resnick, P. B. Storm, E. J. Rushing, and M. Santi Journal of Neurosurgery: Pediatrics Details
1/2/2012 Leaving tissue associated with infrequent intracranial EEG seizure onsets is compatible with post-operative seizure freedom Huang, C., E. D. Marsh, D. M. Ziskind, J. M. Celix, B. Peltzer, M. W. Brown, P. B. Storm, B. Litt, and B. E. Porter Journal of Pediatric Epilepsy Details
5/2/2011 Treatment of a Malignant Peripheral Nerve Sheath Tumor and its Complications Through a Multidisciplinary Approach McLaughlin, E. J., G. G. Heuer, R. G. Whitmore, J. K. Birknes, J. Belasco, D. Sterman, D. W. Low, and P. B. Storm Journal of Neurosurgery: Pediatrics Details
7/1/2010 Activating mutations in BRAF characterize a spectrum of pediatric low-grade gliomas Dougherty MJ, Santi M, Brose MS, Ma C, Resnick AC, Sievert AJ, Storm PB, Biegel JA Neuro Oncology Details
4/17/2010 Comparison Of Novel Computer Detectors And Human Performance For Spike Detection In Intracranial EEG Brown, M. W., 3rd, B. E. Porter, D. J. Dlugos, J. Keating, A. B. Gardner, P. B. Storm, Jr., and E. D. Marsh. Clin Neurophysiol Details
4/5/2010 Interictal EEG Spikes Identify The Region of Electrographic Seizure Onset in Some, But Not All, Pediatric Epilepsy Patients Marsh, E. D., B. Peltzer, M. W. Brown, 3rd, C. Wusthoff, P. B. Storm, Jr., B. Litt, and B. E. Porter Epilepsia Details
4/1/2010 ABC/XYZ Estimates Intracerebral Hemorrhage Volume As A Percent Of Total Brain Volume In Children Beslow, L. A., R. N. Ichord, S. E. Kasner, M. T. Mullen, D. J. Licht, S. E. Smith, P. B. Storm, L. C. Jordan, and S. R. Messe Stroke Details
2/1/2010 Predictors Of Outcome In Childhood Intracerebral Hemorrhage: A Prospective Consecutive Cohort Study Beslow, L. A., D. J. Licht, S. E. Smith, P. B. Storm, G. G. Heuer, R. A. Zimmerman, A. M. Feiler, S. E. Kasner, R. N. Ichord, and L. C. Jordan Stroke Details
1/1/2010 Surgical treatment of a clival-C2 atypical teratoid/rhabdoid tumor Gregory G. Heuer, M.D., Ph.D., Heather Kiefer, B.S., Alexander R. Judkins, M.D., Jean Belasco, M.D., Jaclyn A. Biegel, Ph.D. Eric M. Jackson, M.D., Marc Cohen, M.D., Bert W. O’Malley, Jr., M.D., and Phillip B. Storm, M.D. J Neurosurg Pediatr. Details
11/2/2009 Endovascular and Surgical Treatment of Ruptured Cerebral Aneurysms in Pediatric Patients Stiefel, M. F., G. G. Heuer, A. K. Basil, J. B. Weigele, L. N. Sutton, R. W. Hurst, and P. B. Storm Neurosurgery Details
6/5/2009 Perioperative Seizure Incidence And Risk Factors In 223 Pediatric Brain Tumor Patients without Prior Seizures Hardesty, D. A., M. R. Sanborn, W. E. Parker, and P. B. Storm J Neurosurg Pediatr Details
7/28/2008 Treatment of Pediatric Atlantoaxial Instability with Traditional and Modified Goel-harms Fusion Constructs Heuer, G. G., D. A. Hardesty, D. A. Bhowmick, R. Bailey, S. N. Magge, and P. B. Storm Eur Spine J Details
2/1/2008 Cranial fetus In Fetu. Case Illustration Heuer, G. G., E. S. Schwartz, and P. B. Storm J Neurosurg Pediatr. Details
1/7/2008 Multiple Ruptured Cerebral Aneurysms in a Child With Takayasu Arteritis Magge, S. N., H. I. Chen, M. F. Stiefel, L. Ernst, A. M. Cahill, R. Hurst, and P. B. Storm Journal of Neurosurgery: Pediatrics Details
12/3/2007 Surgical Management of Pediatric Brain Tumors Heuer GG, Jackson EM, Magge SN, Storm PB Expert Rev Anticancer Ther Details
7/2/2007 Dislocation of the mandible into the middle cranial fossa. Case report. Magge SN, Chen HI, Heuer GG, Carrasco LR, Storm PB Journal of Neurosurgery Details
2/5/2007 Cervical Chordoma in a Patient with Tuberous Sclerosis Presenting with Shoulder Pain Storm, P. B., S. N. Magge, K. Kazahaya, and L. N. Sutton Pediatric Neurosurgery Details
2/1/2007 Successful Microsurgical Extraction of a Migrated Coil in a Pediatric Patient After Failed Endovascular Closure of a Blalock-taussig Shunt. Case Report Heuer, G. G., K. A. Zaghloul, R. Roberts, M. F. Stiefel, and P. B. Storm Journal of Neurosurgery Details
10/9/2006 Surgical Clipping Of A PICA Aneurysm In A 6-Month Old Child Storm, P. B., E. Zager, and S. Magge Pediatric Neurosurgery Details
4/3/2006 Use Of Allogeneic Skin Graft For The Closure Of Large Meningomyeloceles: Technical Case Report Danish SF, Samdani AF, Storm PB, Sutton L. Neurosurgery Details
10/4/2004 Systemic BCNU Enhances the Efficacy of Local Delivery of a Topoisomerase I Inhibitor Against Malignant Glioma Storm, P. B., V. M. Renard, J. L. Moriarity, B. Tyler, R. E. Wilentz, H. Brem, and J. D. Weingart Cancer Chemotherapy and Pharmacology Details